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2026-01-23

The Structured Dialogue: How Markdown Elevates LLM Outputs

Master the art of structured prompting by using Markdown to transform generic AI responses into precise, high-quality outputs for complex fields like bioinformatics.

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2026-01-21

Notes on Machine Learning: From Linear Models to Multimodal Transformers

Personal yet rigorous notes tracing the evolution of machine learning from linear and tree-based models to Transformers, language models, and vision–language systems. Written as a structured synthesis for learning and reflection, rather than a definitive textbook.

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2026-01-25

The Soul of Code: Philosophy and Design of Programming Languages

A deep dive into the design motivations and tradeoffs behind major programming languages, highlighting how abstraction, control, and community shape modern software systems.

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2025-03-01

The Illusion in the Lab Coat: How Computational Biology Can Deceive Itself

A critical essay on self-deception, statistical illusion, and methodological fragility in computational biology.

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Browse the complete collection of notes and essays on computational biology

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