Projects
Selected open-source work in multi-omics, machine learning, and network biology. All projects emphasize reproducibility and transparency.
Featured projects
Highlighted work with significant impact or ongoing development
ppiDrugR
PPI-based drug target prioritization using STRING expansion, centrality analysis, and embedding-informed ranking.
SciNexus
An interactive platform for exploring scientific concepts, networks, and relationships, aimed at improving scientific reasoning and reproducibility through visual and computational tools.
RNA–Protein Discordance (Nextflow)
Reproducible workflow for paired RNA–protein analysis with QC, normalization, discordance scoring, and figures.
All projects
Browse the complete collection of open-source work
Antibiotic Resistance Predictor
ML framework for predicting antibiotic resistance using accessory gene profiles, feature selection, and explainability.
Protein Mutation Predictor
Predictive modeling of protein mutations integrating sequence-derived features and statistical learning.
LINCS State Space Navigator
State-space exploration of LINCS L1000 perturbation signatures to study drug-induced transcriptional trajectories.
ImmunoSurv
Computational framework for immune surveillance analysis using transcriptomic signatures and immune pathway activity.
Decoding Disease with Network Biology
Network-centric analysis of disease mechanisms using graph theory, centrality measures, and interaction networks.
Interested in collaborating?
I'm always open to contributions, feedback, and collaboration on these projects. If you have ideas for improvements or want to discuss similar work, let's connect.